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mirror of https://github.com/mariadb-corporation/mariadb-columnstore-engine.git synced 2025-12-13 23:02:14 +03:00

Checkpointing some paranoid assertions & some fixes I noticed.

This commit is contained in:
Patrick LeBlanc
2019-04-12 15:08:01 -05:00
parent 308a25c22b
commit 5443f8662c
8 changed files with 84 additions and 46 deletions

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@@ -368,6 +368,7 @@ void Cache::_makeSpace(size_t size)
assert(currentCacheSize >= (size_t) statbuf.st_size);
currentCacheSize -= statbuf.st_size;
thisMuch -= statbuf.st_size;
logger->log(LOG_WARNING, "Cache: flushing! Try to avoid this, it may deadlock!");
Synchronizer::get()->flushObject(*it);
replicator->remove(cachedFile.string().c_str(), Replicator::LOCAL_ONLY);
LRU_t::iterator toRemove = it++;

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@@ -81,16 +81,9 @@ IOCoordinator * IOCoordinator::get()
void IOCoordinator::willRead(const char *, off_t, size_t)
{
// no cache yet
// not sure we will implement this.
}
#define OPEN(name, mode) \
fd = ::open(filename, mode, 0660); \
if (fd < 0) \
return fd; \
ScopedCloser sc(fd);
int IOCoordinator::loadObject(int fd, uint8_t *data, off_t offset, size_t length) const
{
size_t count = 0;
@@ -242,6 +235,12 @@ int IOCoordinator::read(const char *filename, uint8_t *data, off_t offset, size_
}
int IOCoordinator::write(const char *filename, const uint8_t *data, off_t offset, size_t length)
{
ScopedWriteLock lock(this, filename);
return _write(filename, data, offset, length);
}
int IOCoordinator::_write(const char *filename, const uint8_t *data, off_t offset, size_t length)
{
int err = 0;
uint64_t count = 0;
@@ -252,9 +251,12 @@ int IOCoordinator::write(const char *filename, const uint8_t *data, off_t offset
vector<string> newObjectKeys;
Synchronizer *synchronizer = Synchronizer::get(); // need to init sync here to break circular dependency...
ScopedWriteLock lock(this, filename);
MetadataFile metadata = MetadataFile(filename);
MetadataFile metadata = MetadataFile(filename, MetadataFile::no_create_t());
if (!metadata.exists())
{
errno = EBADF;
return -1;
}
//read metadata determine how many objects overlap
objects = metadata.metadataRead(offset,length);
@@ -280,11 +282,14 @@ int IOCoordinator::write(const char *filename, const uint8_t *data, off_t offset
objectOffset = 0;
}
cache->makeSpace(writeLength+JOURNAL_ENTRY_HEADER_SIZE);
err = replicator->addJournalEntry(i->key.c_str(),&data[count],objectOffset,writeLength);
assert((uint) err == writeLength);
if (err <= 0)
{
// XXXPAT: Count hasn't been updated yet, so I'm not sure what we're trying to do here.
// There's another block below that looks similar. Also similar blocks in append().
if ((count + objectOffset) > i->length)
metadata.updateEntryLength(i->offset, (count + objectOffset));
metadata.writeMetadata(filename);
@@ -304,7 +309,6 @@ int IOCoordinator::write(const char *filename, const uint8_t *data, off_t offset
// there is no overlapping data, or data goes beyond end of last object
while (dataRemaining > 0)
{
cache->makeSpace(dataRemaining);
metadataObject newObject = metadata.addMetadataObject(filename,0);
if (count == 0 && (uint64_t) offset > newObject.offset)
{
@@ -320,10 +324,12 @@ int IOCoordinator::write(const char *filename, const uint8_t *data, off_t offset
writeLength = min(objectSize,dataRemaining);
objectOffset = 0;
}
cache->makeSpace(writeLength);
if ((writeLength + objectOffset) > newObject.length)
metadata.updateEntryLength(newObject.offset, (writeLength + objectOffset));
// send to replicator
err = replicator->newObject(newObject.key.c_str(),data,objectOffset,writeLength);
err = replicator->newObject(newObject.key.c_str(),&data[count],objectOffset,writeLength);
assert((uint) err == writeLength);
if (err <= 0)
{
// update metadataObject length to reflect what awas actually written
@@ -345,14 +351,10 @@ int IOCoordinator::write(const char *filename, const uint8_t *data, off_t offset
synchronizer->newObjects(newObjectKeys);
metadata.writeMetadata(filename);
lock.unlock();
return count;
}
//
// Still fixing stuff here
//
int IOCoordinator::append(const char *filename, const uint8_t *data, size_t length)
{
int err;
@@ -365,8 +367,12 @@ int IOCoordinator::append(const char *filename, const uint8_t *data, size_t leng
ScopedWriteLock lock(this, filename);
MetadataFile metadata = MetadataFile(filename);
MetadataFile metadata = MetadataFile(filename, MetadataFile::no_create_t());
if (!metadata.exists())
{
errno = EBADF;
return -1;
}
uint64_t offset = metadata.getLength();
//read metadata determine if this fits in the last object
@@ -376,6 +382,8 @@ int IOCoordinator::append(const char *filename, const uint8_t *data, size_t leng
{
std::vector<metadataObject>::const_iterator i = objects.begin();
// XXXPAT: Need to handle the case where objectSize has been reduced since i was created
// ie, i->length may be > objectSize here, so objectSize - i->length may be a huge positive #
if ((objectSize - i->length) > 0) // if this is zero then we can't put anything else in this object
{
// figure out how much data to write to this object
@@ -384,6 +392,7 @@ int IOCoordinator::append(const char *filename, const uint8_t *data, size_t leng
cache->makeSpace(writeLength+JOURNAL_ENTRY_HEADER_SIZE);
err = replicator->addJournalEntry(i->key.c_str(),&data[count],i->length,writeLength);
assert((uint) err == writeLength);
if (err <= 0)
{
metadata.updateEntryLength(i->offset, (count + i->length));
@@ -405,6 +414,7 @@ int IOCoordinator::append(const char *filename, const uint8_t *data, size_t leng
{
//Something went wrong this shouldn't overlap objects
logger->log(LOG_ERR,"IOCoordinator::append(): overlapping objects found on append.",count,length);
assert(0);
return -1;
}
// append is starting or adding to a new object
@@ -418,7 +428,8 @@ int IOCoordinator::append(const char *filename, const uint8_t *data, size_t leng
metadataObject newObject = metadata.addMetadataObject(filename,writeLength);
// write the new object
err = replicator->newObject(newObject.key.c_str(),data,0,writeLength);
err = replicator->newObject(newObject.key.c_str(),&data[count],0,writeLength);
assert((uint) err == writeLength);
if (err <= 0)
{
// update metadataObject length to reflect what awas actually written
@@ -519,7 +530,7 @@ int IOCoordinator::truncate(const char *path, size_t newSize)
{
lock.unlock();
uint8_t zero = 0;
err = write(path, &zero, newSize - 1, 1);
err = _write(path, &zero, newSize - 1, 1);
if (err < 0)
return -1;
return 0;
@@ -1043,7 +1054,7 @@ void IOCoordinator::readLock(const string &filename)
boost::unique_lock<boost::mutex> s(lockMutex);
//cout << "read-locking " << filename << endl;
assert(filename[0] == '/');
//assert(filename[0] == '/');
auto ins = locks.insert(pair<string, RWLock *>(filename, NULL));
if (ins.second)
ins.first->second = new RWLock();
@@ -1068,7 +1079,7 @@ void IOCoordinator::writeLock(const string &filename)
boost::unique_lock<boost::mutex> s(lockMutex);
//cout << "write-locking " << filename << endl;
assert(filename[0] == '/');
//assert(filename[0] == '/');
auto ins = locks.insert(pair<string, RWLock *>(filename, NULL));
if (ins.second)
ins.first->second = new RWLock();

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@@ -86,6 +86,7 @@ class IOCoordinator : public boost::noncopyable
void remove(const boost::filesystem::path &path);
void deleteMetaFile(const boost::filesystem::path &file);
int _write(const char *filename, const uint8_t *data, off_t offset, size_t length);
int loadObjectAndJournal(const char *objFilename, const char *journalFilename,
uint8_t *data, off_t offset, size_t length) const;

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@@ -3,6 +3,7 @@
#include "IOCoordinator.h"
#include "SMLogging.h"
#include "Cache.h"
#include "Utilities.h"
#include <sys/types.h>
#include <sys/stat.h>
#include <fcntl.h>
@@ -84,21 +85,11 @@ Replicator * Replicator::get()
return rep;
}
struct scoped_closer {
scoped_closer(int f) : fd(f) { }
~scoped_closer() {
int s_errno = errno;
::close(fd);
errno = s_errno;
}
int fd;
};
#define OPEN(name, mode) \
fd = ::open(name, mode, 0600); \
if (fd < 0) \
return fd; \
scoped_closer sc(fd);
ScopedCloser sc(fd);
int Replicator::newObject(const char *filename, const uint8_t *data, off_t offset, size_t length )
{
@@ -132,20 +123,24 @@ int Replicator::addJournalEntry(const char *filename, const uint8_t *data, off_t
uint64_t thisEntryMaxOffset = (offset + length - 1);
Cache *cache = Cache::get(); // need to init sync here to break circular dependency...
if (!boost::filesystem::exists(journalFilename))
bool exists = boost::filesystem::exists(journalFilename);
OPEN(journalFilename.c_str(), (exists ? O_RDWR : O_WRONLY | O_CREAT))
if (!exists)
{
// create new journal file with header
OPEN(journalFilename.c_str(), O_WRONLY | O_CREAT);
//OPEN(journalFilename.c_str(), O_WRONLY | O_CREAT);
string header = (boost::format("{ \"version\" : \"%03i\", \"max_offset\" : \"%011u\" }") % version % thisEntryMaxOffset).str();
cache->makeSpace(header.size());
err = ::write(fd, header.c_str(), header.length() + 1);
assert((uint) err == header.length() + 1);
if (err <= 0)
return err;
}
else
{
// read the existing header and check if max_offset needs to be updated
OPEN(journalFilename.c_str(), O_RDWR);
//OPEN(journalFilename.c_str(), O_RDWR);
boost::shared_array<char> headertxt = seekToEndOfHeader1(fd);
stringstream ss;
ss << headertxt.get();
@@ -157,21 +152,28 @@ int Replicator::addJournalEntry(const char *filename, const uint8_t *data, off_t
{
string header = (boost::format("{ \"version\" : \"%03i\", \"max_offset\" : \"%011u\" }") % version % thisEntryMaxOffset).str();
err = ::pwrite(fd, header.c_str(), header.length() + 1,0);
assert((uint) err == header.length() + 1);
if (err <= 0)
return err;
}
}
OPEN(journalFilename.c_str(), O_WRONLY | O_APPEND);
// XXXPAT: avoid closing and right away opening the file again when it's easy not to.
// Just reposition the file pointer.
//OPEN(journalFilename.c_str(), O_WRONLY | O_APPEND);
::lseek(fd, 0, SEEK_END);
err = ::write(fd, offlen, JOURNAL_ENTRY_HEADER_SIZE);
assert(err == JOURNAL_ENTRY_HEADER_SIZE);
if (err <= 0)
return err;
while (count < length) {
err = ::write(fd, &data[count], length - count);
if (err <= 0)
if (err < 0)
{
/* XXXPAT: We can't return anything but success here, unless we also update the entry's
header */
if (count > 0) // return what was successfully written
return count;
else

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@@ -257,6 +257,12 @@ void Synchronizer::process(list<string>::iterator name)
pending->opFlags, e.what());
success = false;
sleep(1);
continue;
/* TODO: Need to think this about this requeue logic again. The potential problem is that
there may be threads waiting for this job to finish. If the insert doesn't happen because
there is already a job in pendingOps for the same file, then the threads waiting on this
job never get woken, right?? Or, can that never happen for some reason?
*/
s.lock();
auto inserted = pendingOps.insert(pair<string, boost::shared_ptr<PendingOps> >(key, pending));
if (!inserted.second)

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@@ -107,7 +107,7 @@ void ThreadPool::_processingLoop()
threadsWaiting++;
bool timedout = !jobAvailable.timed_wait<>(s, idleThreadTimeout);
threadsWaiting--;
if (timedout)
if (timedout && jobs.empty())
return;
}
if (jobs.empty())

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@@ -54,7 +54,7 @@ void ScopedWriteLock::unlock()
}
}
ScopedCloser::ScopedCloser(int f) : fd(f) { }
ScopedCloser::ScopedCloser(int f) : fd(f) { assert(f != -1); }
ScopedCloser::~ScopedCloser() {
int s_errno = errno;
::close(fd);
@@ -64,6 +64,7 @@ ScopedCloser::~ScopedCloser() {
SharedCloser::SharedCloser(int f)
{
block = new CtrlBlock();
assert(f != -1);
block->fd = f;
block->refCount = 1;
}
@@ -78,8 +79,10 @@ SharedCloser::~SharedCloser()
block->refCount--;
if (block->refCount == 0)
{
int s_errno = errno;
::close(block->fd);
delete block;
errno = s_errno;
}
}

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@@ -591,10 +591,23 @@ bool IOCTruncate()
bf::path cachedObjectPath = cachePath/testObjKey;
makeTestMetadata(metadataFile.string().c_str());
makeTestObject(objectPath.string().c_str());
int err;
uint8_t buf[1<<14];
int *buf32 = (int *) buf;
// Extending a file doesn't quite work yet, punting on that part of the test for now
/* Need to enable this later.
// Extend the test file to 10000 bytes
err = ioc->truncate(testFile, 10000);
assert(!err);
err = ioc->read(testFile, buf, 0, 10000);
assert(err == 10000);
// verity the data is what it should be
for (int i = 0; i < 2048; i++)
assert(buf32[i] == i);
for (int i = 2048; i < 2500; i++)
assert(buf32[i] == 0);
*/
err = ioc->truncate(testFile, 4000);
assert(!err);
@@ -635,7 +648,6 @@ bool IOCTruncate()
memset(buf, 0, 16384);
err = ioc->read(testFile, buf, 0, 16384);
assert(err == 16384);
int *buf32 = (int *) buf;
for (int i = 0; i < 16384/4; i++)
assert(buf32[i] == (i % 2048));
assert(bf::exists(cachedSecondObject));
@@ -1451,6 +1463,8 @@ int main()
opentask();
//metadataUpdateTest();
// create the metadatafile to use
MetadataFile tmpfile("metadataJournalTest");
// requires 8K object size to test boundries
//Case 1 new write that spans full object
metadataJournalTest((10*sizeKB),0);