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using cmake option INSTALL_LAYOUT=STANDALONE would produce the layout as in tar.gz or zip packages. INSTALL_LAYOUT=UNIX will produce unixish install layout (with mysqld being in sbin subdirectory , libs in lib/mysql etc). This layout is used for RPM packages. Subtle differences in both packages unfortunately lead to the need to recompile MySQL to use with other package type - as otherwise for example default plugins or data directories would be wrong set. There are numerous other variables that allow fine-tuning packaging layout. (INSTALL_BINDIR, INSTALL_LIBDIR , INSTALL_PLUGINDIR etc). This options are different from autotools as they do not expect full paths to directories, but only subdirectory of CMAKE_INSTALL_PREFIX. There are 2 special options that expect full directory paths - MYSQL_DATADIR that defines default MYSQL data directory (autotools equivalent is --localstatedir) - SYSCONFDIR can be added to search my.cnf search path (autotools equivalent is --sysconfdir)