Adapt default_tmp_storage_engine implementation from mysql-5.6
New feature (as compared to 5.6), default_tmp_storage_engine=NULL
means that temporary tables will use default_storage_engine value.
This makes the behavior backward compatible.
Some variables weren't cleared properly so consequitive embedded server start/stop failed.
Cleanups added. Also mysql_client_test.c extended to test that (taken from Mattias Johnson's patch)
replication causing replication to fail.
In parallel replication, we run transactions from the master in parallel, but
force them to commit in the same order they did on the master. If we force T1
to commit before T2, but T2 holds eg. a row lock that is needed by T1, we get
a deadlock when T2 waits until T1 has committed.
Usually, we do not run T1 and T2 in parallel if there is a chance that they
can have conflicting locks like this, but there are certain edge cases where
it can occasionally happen (eg. MDEV-5914, MDEV-5941, MDEV-6020). The bug was
that this would cause replication to hang, eventually getting a lock timeout
and causing the slave to stop with error.
With this patch, InnoDB will report back to the upper layer whenever a
transactions T1 is about to do a lock wait on T2. If T1 and T2 are parallel
replication transactions, and T2 needs to commit later than T1, we can thus
detect the deadlock; we then kill T2, setting a flag that causes it to catch
the kill and convert it to a deadlock error; this error will then cause T2 to
roll back and release its locks (so that T1 can commit), and later T2 will be
re-tried and eventually also committed.
The kill happens asynchroneously in a slave background thread; this is
necessary, as the reporting from InnoDB about lock waits happen deep inside
the locking code, at a point where it is not possible to directly call
THD::awake() due to mutexes held.
Deadlock is assumed to be (very) rarely occuring, so this patch tries to
minimise the performance impact on the normal case where no deadlocks occur,
rather than optimise the handling of the occasional deadlock.
Also fix transaction retry due to deadlock when it happens after a transaction
already signalled to later transactions that it started to commit. In this
case we need to undo this signalling (and later redo it when we commit again
during retry), so following transactions will not start too early.
Also add a missing thd->send_kill_message() that got triggered during testing
(this corrects an incorrect fix for MySQL Bug#58933).
SHOW PROCESSLIST, SHOW BINLOGS
Problem: A deadlock was occurring when 4 threads were
involved in acquiring locks in the following way
Thread 1: Dump thread ( Slave is reconnecting, so on
Master, a new dump thread is trying kill
zombie dump threads. It acquired thread's
LOCK_thd_data and it is about to acquire
mysys_var->current_mutex ( which LOCK_log)
Thread 2: Application thread is executing show binlogs and
acquired LOCK_log and it is about to acquire
LOCK_index.
Thread 3: Application thread is executing Purge binary logs
and acquired LOCK_index and it is about to
acquire LOCK_thread_count.
Thread 4: Application thread is executing show processlist
and acquired LOCK_thread_count and it is
about to acquire zombie dump thread's
LOCK_thd_data.
Deadlock Cycle:
Thread 1 -> Thread 2 -> Thread 3-> Thread 4 ->Thread 1
The same above deadlock was observed even when thread 4 is
executing 'SELECT * FROM information_schema.processlist' command and
acquired LOCK_thread_count and it is about to acquire zombie
dump thread's LOCK_thd_data.
Analysis:
There are four locks involved in the deadlock. LOCK_log,
LOCK_thread_count, LOCK_index and LOCK_thd_data.
LOCK_log, LOCK_thread_count, LOCK_index are global mutexes
where as LOCK_thd_data is local to a thread.
We can divide these four locks in two groups.
Group 1 consists of LOCK_log and LOCK_index and the order
should be LOCK_log followed by LOCK_index.
Group 2 consists of other two mutexes
LOCK_thread_count, LOCK_thd_data and the order should
be LOCK_thread_count followed by LOCK_thd_data.
Unfortunately, there is no specific predefined lock order defined
to follow in the MySQL system when it comes to locks across these
two groups. In the above problematic example,
there is no problem in the way we are acquiring the locks
if you see each thread individually.
But If you combine all 4 threads, they end up in a deadlock.
Fix:
Since everything seems to be fine in the way threads are taking locks,
In this patch We are changing the duration of the locks in Thread 4
to break the deadlock. i.e., before the patch, Thread 4
('show processlist' command) mysqld_list_processes()
function acquires LOCK_thread_count for the complete duration
of the function and it also acquires/releases
each thread's LOCK_thd_data.
LOCK_thread_count is used to protect addition and
deletion of threads in global threads list. While show
process list is looping through all the existing threads,
it will be a problem if a thread is exited but there is no problem
if a new thread is added to the system. Hence a new mutex is
introduced "LOCK_thd_remove" which will protect deletion
of a thread from global threads list. All threads which are
getting exited should acquire LOCK_thd_remove
followed by LOCK_thread_count. (It should take LOCK_thread_count
also because other places of the code still thinks that exit thread
is protected with LOCK_thread_count. In this fix, we are changing
only 'show process list' query logic )
(Eg: unlink_thd logic will be protected with
LOCK_thd_remove).
Logic of mysqld_list_processes(or file_schema_processlist)
will now be protected with 'LOCK_thd_remove' instead of
'LOCK_thread_count'.
Now the new locking order after this patch is:
LOCK_thd_remove -> LOCK_thd_data -> LOCK_log ->
LOCK_index -> LOCK_thread_count
committer: Christopher Powers <chris.powers@oracle.com>
branch nick: mysql-5.6-bug16750433
timestamp: Fri 2013-06-28 07:48:12 -0500
message:
Bug#16750433 - THE STATEMENT DIGEST DOES NOT SHOW THE SLAVE SQL
THREAD STATEMENTS
revno: 5414.1.1
committer: Marc Alff <marc.alff@oracle.com>
branch nick: mysql-5.6-bug17271055
timestamp: Thu 2013-08-29 12:29:25 +0200
message:
Bug#17271055 "STATEMENT/COM" EVENT MEANING IS UNCLEAR
(test case was merged with perfschema 5.6.17)
Reason for the bug was an optimization for higher connect speed where we moved when global status was updated,
but forgot to update states when slave thread dies.
Fixed by adding thd->add_status_to_global() before deleting slave thread's thd.
mysys/my_delete.c:
Added missing newline
sql/mysqld.cc:
Use add_status_to_global()
sql/slave.cc:
Added missing add_status_to_global()
sql/sql_class.cc:
Use add_status_to_global()
sql/sql_class.h:
Simplify adding local status to global by adding add_status_to_global()
Before, the arrival of same GTID twice in multi-source replication
would cause double-apply or in gtid strict mode an error.
Keep the behaviour, but add an option --gtid-ignore-duplicates which
allows to correctly handle duplicates, ignoring all but the first.
This relies on the user ensuring correct configuration so that
sequence numbers are strictly increasing within each replication
domain; then duplicates can be detected simply by comparing the
sequence numbers against what is already applied.
Only one master connection (but possibly multiple parallel worker
threads within that connection) is allowed to apply events within
one replication domain at a time; any other connection that
receives a GTID in the same domain either discards it (if it is
already applied) or waits for the other connection to not have
any events to apply.
Intermediate patch, as proof-of-concept for testing. The main limitation
is that currently it is only implemented for parallel replication,
@@slave_parallel_threads > 0.
Clean up and improve the parallel implementation code, mainly related to
scheduling of work to threads and handling of stop and errors.
Fix a lot of bugs in various corner cases that could lead to crashes or
corruption.
Fix that a single replication domain could easily grab all worker threads and
stall all other domains; now a configuration variable
--slave-domain-parallel-threads allows to limit the number of
workers.
Allow next event group to start as soon as previous group begins the commit
phase (as opposed to when it ends it); this allows multiple event groups on
the slave to participate in group commit, even when no other opportunities for
parallelism are available.
Various fixes:
- Fix some races in the rpl.rpl_parallel test case.
- Fix an old incorrect assertion in Log_event iocache read.
- Fix repeated malloc/free of wait_for_commit and rpl_group_info objects.
- Simplify wait_for_commit wakeup logic.
- Fix one case in queue_for_group_commit() where killing one thread would
fail to correctly signal the error to the next, causing loss of the
transaction after slave restart.
- Fix leaking of pthreads (and their allocated stack) due to missing
PTHREAD_CREATE_DETACHED attribute.
- Fix how one batch of group-committed transactions wait for the previous
batch before starting to execute themselves. The old code had a very
complex scheduling where the first transaction was handled differently,
with subtle bugs in corner cases. Now each event group is always scheduled
for a new worker (in a round-robin fashion amongst available workers).
Keep a count of how many transactions have started to commit, and wait for
that counter to reach the appropriate value.
- Fix slave stop to wait for all workers to actually complete processing;
before, the wait was for update of last_committed_sub_id, which happens a
bit earlier, and could leave worker threads potentially accessing bits of
the replication state that is no longer valid after slave stop.
- Fix a couple of places where the test suite would kill a thread waiting
inside enter_cond() in connection with debug_sync; debug_sync + kill can
crash in rare cases due to a race with mysys_var_current_mutex in this
case.
- Fix some corner cases where we had enter_cond() but no exit_cond().
- Fix that we could get failure in wait_for_prior_commit() but forget to flag
the error with my_error().
- Fix slave stop (both for normal stop and stop due to error). Now, at stop
we pick a specific safe point (in terms of event groups executed) and make
sure that all event groups before that point are executed to completion,
and that no event group after start executing; this ensures a safe place to
restart replication, even for non-transactional stuff/DDL. In error stop,
make sure that all prior event groups are allowed to execute to completion,
and that any later event groups that have started are rolled back, if
possible. The old code could leave eg. T1 and T3 committed but T2 not, or
it could even leave half a transaction not rolled back in some random
worker, which would cause big problems when that worker was later reused
after slave restart.
- Fix the accounting of amount of events queued for one worker. Before, the
amount was reduced immediately as soon as the events were dequeued (which
happens all at once); this allowed twice the amount of events to be queued
in memory for each single worker, which is not what users would expect.
- Fix that an error set during execution of one event was sometimes not
cleared before executing the next, causing problems with the error
reporting.
- Fix incorrect handling of thd->killed in worker threads.
This is port of fix for MySQL BUG#17647863.
revno: 5572
revision-id: jon.hauglid@oracle.com-20131030232243-b0pw98oy72uka2sj
committer: Jon Olav Hauglid <jon.hauglid@oracle.com>
timestamp: Thu 2013-10-31 00:22:43 +0100
message:
Bug#17647863: MYSQL DOES NOT COMPILE ON OSX 10.9 GM
Rename test() macro to MY_TEST() to avoid conflict with libc++.
Pre-MDL versions had direct relationship between LOCK_open and
LOCK_global_system_variables, e.g.:
intern_sys_var_ptr // locks LOCK_global_system_variable
mysql_sys_var_char
create_options_are_valid
ha_innobase::create
handler::ha_create
ha_create_table
rea_create_table
mysql_create_table_no_lock // locks LOCK_open
mysql_create_table
With MDL this relationship was removed, but mutex order was still
recorded. In fact there is indirect relationship between LOCK_open
and LOCK_global_system_variables via rwlocks in reverse order.
Removed LOCK_open and LOCK_global_system_variables order recording,
instead assert that LOCK_open is never held in intern_sys_var_ptr().
This solves only one of many problems detected with MDEV-5089.
MDEV-4984: Implement MASTER_GTID_WAIT() and @@LAST_GTID.
MDEV-4726: Race in mysql-test/suite/rpl/t/rpl_gtid_stop_start.test
MDEV-5636: Deadlock in RESET MASTER
MASTER_GTID_WAIT() is similar to MASTER_POS_WAIT(), but works with a
GTID position rather than an old-style filename/offset.
@@LAST_GTID gives the GTID assigned to the last transaction written
into the binlog.
Together, the two can be used by applications to obtain the GTID of
an update on the master, and then do a MASTER_GTID_WAIT() for that
position on any read slave where it is important to get results that
are caught up with the master at least to the point of the update.
The implementation of MASTER_GTID_WAIT() is implemented in a way
that tries to minimise the performance impact on the SQL threads,
even in the presense of many waiters on single GTID positions (as
from @@LAST_GTID).
- CREATE TABLE is by default executed on the slave as CREATE OR REPLACE
- DROP TABLE is by default executed on the slave as DROP TABLE IF NOT EXISTS
This means that a slave will by default continue even if we try to create
a table that existed on the slave (the table will be deleted and re-created) or
if we try to drop a table that didn't exist on the slave.
This should be safe as instead of having the slave stop because of an inconsistency between
master and slave, it will fix the inconsistency.
Those that would prefer to get a stopped slave instead for the above cases can set slave_ddl_exec_mode to STRICT.
- Ensure that a CREATE OR REPLACE TABLE which dropped a table is replicated
- DROP TABLE that generated an error on master is handled as an identical DROP TABLE on the slave (IF NOT EXISTS is not added in this case)
- Added slave_ddl_exec_mode variable to decide how DDL's are replicated
New logic for handling BEGIN GTID ... COMMIT from the binary log:
- When we find a BEGIN GTID, we start a transaction and set OPTION_GTID_BEGIN
- When we find COMMIT, we reset OPTION_GTID_BEGIN and execute the normal COMMIT code.
- While OPTION_GTID_BEGIN is set:
- We don't generate implict commits before or after statements
- All tables are regarded as transactional tables in the binary log (to ensure things are executed exactly as on the master)
- We reset OPTION_GTID_BEGIN also on rollback
This will help ensuring that we don't get any sporadic commits (and thus new GTID's) on the slave and will help keep the GTID's between master and slave in sync.
mysql-test/extra/rpl_tests/rpl_log.test:
Added testing of mode slave_ddl_exec_mode=STRICT
mysql-test/r/mysqld--help.result:
New help messages
mysql-test/suite/rpl/r/create_or_replace_mix.result:
Testing of CREATE OR REPLACE TABLE with replication
mysql-test/suite/rpl/r/create_or_replace_row.result:
Testing of CREATE OR REPLACE TABLE with replication
mysql-test/suite/rpl/r/create_or_replace_statement.result:
Testing replication of create or replace
mysql-test/suite/rpl/r/rpl_gtid_startpos.result:
Test must be run in slave_ddl_exec_mode=STRICT as part of the test depends on that DROP TABLE should fail on slave.
mysql-test/suite/rpl/r/rpl_row_log.result:
Updated result
mysql-test/suite/rpl/r/rpl_row_log_innodb.result:
Updated result
mysql-test/suite/rpl/r/rpl_row_show_relaylog_events.result:
Updated result
mysql-test/suite/rpl/r/rpl_stm_log.result:
Updated result
mysql-test/suite/rpl/r/rpl_stm_mix_show_relaylog_events.result:
Updated result
mysql-test/suite/rpl/r/rpl_temp_table_mix_row.result:
Updated result
mysql-test/suite/rpl/t/create_or_replace.inc:
Testing of CREATE OR REPLACE TABLE with replication
mysql-test/suite/rpl/t/create_or_replace_mix.cnf:
Testing of CREATE OR REPLACE TABLE with replication
mysql-test/suite/rpl/t/create_or_replace_mix.test:
Testing of CREATE OR REPLACE TABLE with replication
mysql-test/suite/rpl/t/create_or_replace_row.cnf:
Testing of CREATE OR REPLACE TABLE with replication
mysql-test/suite/rpl/t/create_or_replace_row.test:
Testing of CREATE OR REPLACE TABLE with replication
mysql-test/suite/rpl/t/create_or_replace_statement.cnf:
Testing of CREATE OR REPLACE TABLE with replication
mysql-test/suite/rpl/t/create_or_replace_statement.test:
Testing of CREATE OR REPLACE TABLE with replication
mysql-test/suite/rpl/t/rpl_gtid_startpos.test:
Test must be run in slave_ddl_exec_mode=STRICT as part of the test depends on that DROP TABLE should fail on slave.
mysql-test/suite/rpl/t/rpl_stm_log.test:
Removed some lines
mysql-test/suite/sys_vars/r/slave_ddl_exec_mode_basic.result:
Testing of slave_ddl_exec_mode
mysql-test/suite/sys_vars/t/slave_ddl_exec_mode_basic.test:
Testing of slave_ddl_exec_mode
sql/handler.cc:
Regard all tables as transactional in commit if OPTION_GTID_BEGIN is set.
This is to ensure that statments are not commited too early if non transactional tables are used.
sql/log.cc:
Regard all tables as transactional in commit if OPTION_GTID_BEGIN is set.
Also treat 'direct' log events as transactional (to get them logged as they where on the master)
sql/log_event.cc:
Ensure that the new error from DROP TABLE when trying to drop a view is treated same as the old one.
Store error code that slave expects in THD.
Set OPTION_GTID_BEGIN if we find a BEGIN.
Reset OPTION_GTID_BEGIN if we find a COMMIT.
sql/mysqld.cc:
Added slave_ddl_exec_mode_options
sql/mysqld.h:
Added slave_ddl_exec_mode_options
sql/rpl_gtid.cc:
Reset OPTION_GTID_BEGIN if we record a gtid (safety)
sql/sql_class.cc:
Regard all tables as transactional in commit if OPTION_GTID_BEGIN is set.
sql/sql_class.h:
Added to THD: log_current_statement and slave_expected_error
sql/sql_insert.cc:
Ensure that CREATE OR REPLACE is logged if table was deleted.
Don't do implicit commit for CREATE if we are under OPTION_GTID_BEGIN
sql/sql_parse.cc:
Change CREATE TABLE -> CREATE OR REPLACE TABLE for slaves
Change DROP TABLE -> DROP TABLE IF EXISTS for slaves
CREATE TABLE doesn't force implicit commit in case of OPTION_GTID_BEGIN
Don't do commits before or after any statement if OPTION_GTID_BEGIN was set.
sql/sql_priv.h:
Added OPTION_GTID_BEGIN
sql/sql_show.cc:
Enhanced store_create_info() to also be able to handle CREATE OR REPLACE
sql/sql_show.h:
Updated prototype
sql/sql_table.cc:
Ensure that CREATE OR REPLACE is logged if table was deleted.
sql/sys_vars.cc:
Added slave_ddl_exec_mode
sql/transaction.cc:
Added warning if we got a GTID under OPTION_GTID_BEGIN
Plugins get error notifications only when my_message_sql() is called.
But errors are launched with THD::raise_condition() calls in other
places. These are push_warning(), implementations of SIGNAL and
RESIGNAL commands.
So it makes sence to notify plugins there in THD::raise_condition().
Analysis
--------
Running 'MYSQLD --help --verbose' as ROOT user without
using '--user' option displays the help contents but
aborts at the end with an exit code '1'.
While starting the server, a validation is performed to
ensure when the server is started as root user, it should
be done using '--user' option. Else we abort. In case
of help, we dump the help contents and abort.
Fix:
---
During the validation, we skip aborting the server incase
we are using the help option under the condition mentioned
above.
NOTE: Test case has not been added since it requires using
'root' user.
- Added MALLOC_LIBRARY variable to hold name of malloc library
- Back ported valgrind related fixes from jemalloc 3.4.1 to the included jemalloc 3.3.1
- Renamed bitmap_init() and bitmap_free() to my_bitmap_init() and my_bitmap_free() to avoid clash with jemalloc 3.4.1
- Use option --soname-synonyms=somalloc=NON to valgrind when using jemalloc
- Show version related variables in mysqld --help
-- Added SHOW_VALUE_IN_HELP marker
Increased back_log to 150 as the original value was a bit too small
CMakeLists.txt:
Added MALLOC_LIBRARY variable to hold name of malloc library
cmake/jemalloc.cmake:
Added MALLOC_LIBRARY variable to hold name of malloc library
config.h.cmake:
Added MALLOC_LIBRARY variable to hold name of malloc library
extra/jemalloc/ChangeLog:
Updates changelog
extra/jemalloc/include/jemalloc/internal/arena.h:
Backported valgrind fixes from jemalloc 3.4.1
extra/jemalloc/include/jemalloc/internal/jemalloc_internal.h.in:
Backported valgrind fixes from jemalloc 3.4.1
extra/jemalloc/include/jemalloc/internal/private_namespace.h:
Backported valgrind fixes from jemalloc 3.4.1
extra/jemalloc/include/jemalloc/internal/tcache.h:
Backported valgrind fixes from jemalloc 3.4.1
extra/jemalloc/src/arena.c:
Backported valgrind fixes from jemalloc 3.4.1
include/my_bitmap.h:
Renamed bitmap_init() and bitmap_free() to my_bitmap_init() and my_bitmap_free() to avoid clash with jemalloc 3.4.1
mysql-test/mysql-test-run.pl:
Use option --soname-synonyms=somalloc=NON to valgrind when using jemalloc
mysql-test/valgrind.supp:
Supression of memory leak in OpenSuse 12.3
mysys/my_bitmap.c:
Renamed bitmap_init() and bitmap_free() to my_bitmap_init() and my_bitmap_free()
sql/ha_ndbcluster_binlog.cc:
Renames
sql/ha_ndbcluster_cond.h:
Renames
sql/ha_partition.cc:
Renames
sql/handler.cc:
Renames
sql/item_subselect.cc:
Renames
sql/log_event.cc:
Renames
sql/log_event_old.cc:
Renames
sql/mysqld.cc:
Renames
Show version related variables in mysqld --help
sql/opt_range.cc:
Renames
sql/opt_table_elimination.cc:
Renames
sql/partition_info.cc:
Renames
sql/rpl_injector.h:
Renames
sql/set_var.h:
Renames
sql/slave.cc:
Renames
sql/sql_bitmap.h:
Renames
sql/sql_insert.cc:
Renames
sql/sql_lex.h:
Renames
sql/sql_parse.cc:
Renames
sql/sql_partition.cc:
Renames
sql/sql_select.cc:
Renames
sql/sql_show.cc:
Renames
sql/sql_update.cc:
Renames
sql/sys_vars.cc:
Show version related variables in mysqld --help
sql/sys_vars.h:
Added SHOW_VALUE_IN_HELP marker for variables that should be shown in --help
sql/table.cc:
Renames
sql/table.h:
Removed not used bitmap_init_value
storage/connect/ha_connect.cc:
Removed compiler warning
storage/maria/ma_open.c:
Renames
unittest/mysys/bitmap-t.c:
Renames
- This was done to get better performance when doing a lot of connections.
Ensure that thread_cache_size is not larger than max_connections (trivial optimizations).
Fixed that the --host_cache_size=# startup option works
mysql-test/r/variables.result:
Increase back_log to 150
sql/hostname.cc:
Fixed that the --host_cache_size=# startup option works
sql/mysqld.cc:
Ensure that back_log and thread_cache_size is not set higher than max_connections (as this would not make any sense).
sql/sys_vars.cc:
Increased back_log to 150
There were some places where insufficient locking between
parallel threads could cause invalid memory accesses and
possibly other grief.
This patch adds the missing locking, and moves the locking
into the struct rpl_binlog_state methods to make it easier
to see that proper locking is in place everywhere.
Fixed the following compilation errors and test failures:
- maria SE: "stage_waiting_for_a_resource" wasn't declared w/o PFS
- sql_repl.h: PSI_mutex_key is not available in non-PFS builds
- mysqld.cc: pfs_param is not available in non-PFS builds
- mysqld.cc: init_show_explain_psi_keys() is not available in non-PFS builds
- mysqld.cc: call net_before_header_psi, net_after_header_psi even if PFS
is not available so that thread enters stage_init at proper time. Fixes
sp-threads and a few tests in funcs_1.
- myisam_file_io.opt: added missing loose prefix
Problem: The "--local-install" service does not perform as expected for, at least,
Windows.
Fix: A NULL pointer was dereferenced due to which there was crash.A check was introduced
for NULL string before dereferencing it.No test cases written as it is a bug during
installation.
