recv_log_recover_10_5(): Make reads aligned by 4096 bytes, to avoid
any trouble in case the file was opened in O_DIRECT mode and
the physical block size is larger than 512 bytes.
Because innodb_log_file_size used to be defined in whole megabytes,
reading multiples of 4096 bytes instead of 512 should not be an issue.
The new statistics is enabled by adding the "engine", "innodb" or "full"
option to --log-slow-verbosity
Example output:
# Pages_accessed: 184 Pages_read: 95 Pages_updated: 0 Old_rows_read: 1
# Pages_read_time: 17.0204 Engine_time: 248.1297
Page_read_time is time doing physical reads inside a storage engine.
(Writes cannot be tracked as these are usually done in the background).
Engine_time is the time spent inside the storage engine for the full
duration of the read/write/update calls. It uses the same code as
'analyze statement' for calculating the time spent.
The engine statistics is done with a generic interface that should be
easy for any engine to use. It can also easily be extended to provide
even more statistics.
Currently only InnoDB has counters for Pages_% and Undo_% status.
Engine_time works for all engines.
Implementation details:
class ha_handler_stats holds all engine stats. This class is included
in handler and THD classes.
While a query is running, all statistics is updated in the handler. In
close_thread_tables() the statistics is added to the THD.
handler::handler_stats is a pointer to where statistics should be
collected. This is set to point to handler::active_handler_stats if
stats are requested. If not, it is set to 0.
handler_stats has also an element, 'active' that is 1 if stats are
requested. This is to allow engines to avoid doing any 'if's while
updating the statistics.
Cloned or partition tables have the pointer set to the base table if
status are requested.
There is a small performance impact when using --log-slow-verbosity=engine:
- All engine calls in 'select' will be timed.
- IO calls for InnoDB reads will be timed.
- Incrementation of counters are done on local variables and accesses
are inline, so these should have very little impact.
- Statistics has to be reset for each statement for the THD and each
used handler. This is only 40 bytes, which should be neglectable.
- For partition tables we have to loop over all partitions to update
the handler_status as part of table_init(). Can be optimized in the
future to only do this is log-slow-verbosity changes. For this to work
we have to update handler_status for all opened partitions and
also for all partitions opened in the future.
Other things:
- Added options 'engine' and 'full' to log-slow-verbosity.
- Some of the new files in the test suite comes from Percona server, which
has similar status information.
- buf_page_optimistic_get(): Do not increment any counter, since we are
only validating a pointer, not performing any buf_pool.page_hash lookup.
- Added THD argument to save_explain_data_intern().
- Switched arguments for save_explain_.*_data() to have
always THD first (generates better code as other functions also have THD
first).
ha_innobase::delete_table(): Also on DROP SEQUENCE, do try to drop any
persistent statistics. They should really not be created for
SEQUENCE objects (which internally are 1-row no-rollback tables),
but that is how happened to always work.
i_s_innodb_buffer_page_get_info(): Correct a condition.
After crash recovery, there may be some buffer pool pages in FREED state,
containing garbage (invalid data page contents). Let us ignore such pages
in the INFORMATION_SCHEMA output.
The test innodb.innodb_defragment_fill_factor will be removed, because
the queries that it is invoking on information_schema.innodb_buffer_page
would start to fail. The defragmentation feature was removed in
commit 7ca89af6f8 in MariaDB Server 11.1.
Tested by: Matthias Leich
The fix is in replacing the waiting for the whole purge finishing
with the the waiting for only delete-marked records purging finishing.
Reviewed by: Marko Mäkelä
- InnoDB bulk insert operation aborts the server for redundant
table. InnoDB miscalculates the record size in temporary file
for the redundant table. CHAR in redundant row format table
always fixed length, but in temporary file, it is variable-length
for variable-length character sets.
When opening and locking tables, if triggers will be invoked in a
separate database, thd->set_db() is invoked, thus freeeing the memory
and headers which thd->db had previously pointed to. In row based
replication, the event execution logic initializes thd->db to point
to the database which the event targets, which is owned by the
corresponding table share (introduced in d9898c9 for MDEV-7409).
The problem then, is that during the table opening and locking
process for a row event, memory which belongs to the table share
would be freed, which is not valid.
This patch replaces the thd->reset_db() calls to thd->set_db(),
which copies-by-value, rather than by reference. Then when the
memory is freed, our copy of memory is freed, rather than memory
which belongs to a table share.
Notes:
1. The call to change thd->db now happens on a higher-level, in
Rows_log_event::do_apply_event() rather than ::do_exec_row(), in the
call stack. This is because do_exec_row() is called within a loop,
and each invocation would redundantly set and unset the db to the
same value.
2. thd->set_db() is only used if triggers are to be invoked, as
there is no vulnerability in the non-trigger case, and copying
memory would be an unnecessary inefficiency.
Reviewed By:
============
Andrei Elkin <andrei.elkin@mariadb.com>
- InnoDB throws ASAN error while adding the index on virtual column
of system versioned table. InnoDB wrongly assumes that virtual
column collation type changes, creates new column with different
character set. This leads to failure while detaching the column
from indexes.
The test gcol.gcol_purge would reliably hang on 10.6 on a
Microsoft Windows builder without this adjustment.
A similar adjustment was applied in
commit 3e40f9a7f3
to the tests innodb.dml_purge and innodb.instant_alter_purge.
purge_sys_t::sees(): Wrapper for view.sees().
trx_purge_truncate_history(): Invoke purge_sys.sees() instead of
comparing to head.trx_no, to determine if undo pages can be safely freed.
The test innodb.cursor-restore-locking was adjusted by Vladislav Lesin,
as was the the debug instrumentation in row_purge_del_mark().
Reviewed by: Vladislav Lesin
btr_cur_need_opposite_intention(): Check also page_zip_available()
so that we will escalate to exclusive index latch when a non-leaf
page may have to be split further due to ROW_FORMAT=COMPRESSED page
overflow.
Tested by: Matthias Leich
Adding tests demonstrating that columns:
- mysql.innodb_table_stats.last_update
- mysql.innodb_index_stats.last_update
contain sane values close to NOW() rathar than a garbage.
Tests cover these three underlying TIMESTAMP data formats:
- MariaDB Field_timestamp0 - UINT4 based
Like in a MariaDB native installation running with mysql56_temporal_format=0
- MariaDB Field_timestampf - BINARY(4) based, with UNSIGNED_FLAG
Like in a MariaDB native installation running with mysql56_temporal_format=1
- MySQL-alike Field_timestampf - BINARY(4) based, without UNSIGNED_FLAG
Like with a MariaDB server running over a MySQL-5.6 directory
(e.g. during a migragion).
This commit contains a merge from 10.5-MDEV-29293-squash
into 10.6.
Although the bug MDEV-29293 was not reproducible with 10.6,
the fix contains several improvements for wsrep KILL query and
BF abort handling, and addresses the following issues:
* MDEV-30307 KILL command issued inside a transaction is
problematic for galera replication:
This commit will remove KILL TOI replication, so Galera side
transaction context is not lost during KILL.
* MDEV-21075 KILL QUERY maintains nodes data consistency but
breaks GTID sequence: This is fixed as well as KILL does not
use TOI, and thus does not change GTID state.
* MDEV-30372 Assertion in wsrep-lib state: This was caused by
BF abort or KILL when local transaction was in the middle
of group commit. This commit disables THD::killed handling
during commit, so the problem is avoided.
* MDEV-30963 Assertion failure !lock.was_chosen_as_deadlock_victim
in trx0trx.h:1065: The assertion happened when the victim was
BF aborted via MDL while it was committing. This commit changes
MDL BF aborts so that transactions which are committing cannot
be BF aborted via MDL. The RQG grammar attached in the issue
could not reproduce the crash anymore.
Original commit message from 10.5 fix:
MDEV-29293 MariaDB stuck on starting commit state
The problem seems to be a deadlock between KILL command execution
and BF abort issued by an applier, where:
* KILL has locked victim's LOCK_thd_kill and LOCK_thd_data.
* Applier has innodb side global lock mutex and victim trx mutex.
* KILL is calling innobase_kill_query, and is blocked by innodb
global lock mutex.
* Applier is in wsrep_innobase_kill_one_trx and is blocked by
victim's LOCK_thd_kill.
The fix in this commit removes the TOI replication of KILL command
and makes KILL execution less intrusive operation. Aborting the
victim happens now by using awake_no_mutex() and ha_abort_transaction().
If the KILL happens when the transaction is committing, the
KILL operation is postponed to happen after the statement
has completed in order to avoid KILL to interrupt commit
processing.
Notable changes in this commit:
* wsrep client connections's error state may remain sticky after
client connection is closed. This error message will then pop
up for the next client session issuing first SQL statement.
This problem raised with test galera.galera_bf_kill.
The fix is to reset wsrep client error state, before a THD is
reused for next connetion.
* Release THD locks in wsrep_abort_transaction when locking
innodb mutexes. This guarantees same locking order as with applier
BF aborting.
* BF abort from MDL was changed to do BF abort on server/wsrep-lib
side first, and only then do the BF abort on InnoDB side. This
removes the need to call back from InnoDB for BF aborts which originate
from MDL and simplifies the locking.
* Removed wsrep_thd_set_wsrep_aborter() from service_wsrep.h.
The manipulation of the wsrep_aborter can be done solely on
server side. Moreover, it is now debug only variable and
could be excluded from optimized builds.
* Remove LOCK_thd_kill from wsrep_thd_LOCK/UNLOCK to allow more
fine grained locking for SR BF abort which may require locking
of victim LOCK_thd_kill. Added explicit call for
wsrep_thd_kill_LOCK/UNLOCK where appropriate.
* Wsrep-lib was updated to version which allows external
locking for BF abort calls.
Changes to MTR tests:
* Disable galera_bf_abort_group_commit. This test is going to
be removed (MDEV-30855).
* Make galera_var_retry_autocommit result more readable by echoing
cases and expectations into result. Only one expected result for
reap to verify that server returns expected status for query.
* Record galera_gcache_recover_manytrx as result file was incomplete.
Trivial change.
* Make galera_create_table_as_select more deterministic:
Wait until CTAS execution has reached MDL wait for multi-master
conflict case. Expected error from multi-master conflict is
ER_QUERY_INTERRUPTED. This is because CTAS does not yet have open
wsrep transaction when it is waiting for MDL, query gets interrupted
instead of BF aborted. This should be addressed in separate task.
* A new test galera_bf_abort_registering to check that registering trx gets
BF aborted through MDL.
* A new test galera_kill_group_commit to verify correct behavior
when KILL is executed while the transaction is committing.
Co-authored-by: Seppo Jaakola <seppo.jaakola@iki.fi>
Co-authored-by: Jan Lindström <jan.lindstrom@galeracluster.com>
Signed-off-by: Julius Goryavsky <julius.goryavsky@mariadb.com>
The problem seems to be a deadlock between KILL command execution
and BF abort issued by an applier, where:
* KILL has locked victim's LOCK_thd_kill and LOCK_thd_data.
* Applier has innodb side global lock mutex and victim trx mutex.
* KILL is calling innobase_kill_query, and is blocked by innodb
global lock mutex.
* Applier is in wsrep_innobase_kill_one_trx and is blocked by
victim's LOCK_thd_kill.
The fix in this commit removes the TOI replication of KILL command
and makes KILL execution less intrusive operation. Aborting the
victim happens now by using awake_no_mutex() and ha_abort_transaction().
If the KILL happens when the transaction is committing, the
KILL operation is postponed to happen after the statement
has completed in order to avoid KILL to interrupt commit
processing.
Notable changes in this commit:
* wsrep client connections's error state may remain sticky after
client connection is closed. This error message will then pop
up for the next client session issuing first SQL statement.
This problem raised with test galera.galera_bf_kill.
The fix is to reset wsrep client error state, before a THD is
reused for next connetion.
* Release THD locks in wsrep_abort_transaction when locking
innodb mutexes. This guarantees same locking order as with applier
BF aborting.
* BF abort from MDL was changed to do BF abort on server/wsrep-lib
side first, and only then do the BF abort on InnoDB side. This
removes the need to call back from InnoDB for BF aborts which originate
from MDL and simplifies the locking.
* Removed wsrep_thd_set_wsrep_aborter() from service_wsrep.h.
The manipulation of the wsrep_aborter can be done solely on
server side. Moreover, it is now debug only variable and
could be excluded from optimized builds.
* Remove LOCK_thd_kill from wsrep_thd_LOCK/UNLOCK to allow more
fine grained locking for SR BF abort which may require locking
of victim LOCK_thd_kill. Added explicit call for
wsrep_thd_kill_LOCK/UNLOCK where appropriate.
* Wsrep-lib was updated to version which allows external
locking for BF abort calls.
Changes to MTR tests:
* Disable galera_bf_abort_group_commit. This test is going to
be removed (MDEV-30855).
* Record galera_gcache_recover_manytrx as result file was incomplete.
Trivial change.
* Make galera_create_table_as_select more deterministic:
Wait until CTAS execution has reached MDL wait for multi-master
conflict case. Expected error from multi-master conflict is
ER_QUERY_INTERRUPTED. This is because CTAS does not yet have open
wsrep transaction when it is waiting for MDL, query gets interrupted
instead of BF aborted. This should be addressed in separate task.
* A new test galera_kill_group_commit to verify correct behavior
when KILL is executed while the transaction is committing.
Co-authored-by: Seppo Jaakola <seppo.jaakola@iki.fi>
Co-authored-by: Jan Lindström <jan.lindstrom@galeracluster.com>
Signed-off-by: Julius Goryavsky <julius.goryavsky@mariadb.com>
btr_cur_need_opposite_intention(): Check also page_zip_available()
so that we will escalate to exclusive index latch when a non-leaf
page may have to be split further due to ROW_FORMAT=COMPRESSED page
overflow.
Tested by: Matthias Leich
1. log_event.cc stuff should go into log_event_server.cc
2. the test's wait condition is textually different in 10.5, fixed.
3. pre-exec 'optimistic' global var value is correct for 10.5 indeed.
- Update wsrep-lib which contains fix for the assertion
- Fix error handling for appending fragment to streaming log,
make sure tables are closed after rollback.
Signed-off-by: Julius Goryavsky <julius.goryavsky@mariadb.com>
Introduce @@optimizer_switch flag: hash_join_cardinality
When it is on, use EITS statistics to produce tighter bounds for
hash join output cardinality.
Amended by Monty.
Reviewed by: Monty <monty@mariadb.org>
When using binlog_row_image=FULL with sequence table inserts, a
replica can deadlock because it treats full inserts in a sequence as DDL
statements by getting an exclusive lock on the sequence table. It
has been observed that with parallel replication, this exclusive
lock on the sequence table can lead to a deadlock where one
transaction has the exclusive lock and is waiting on a prior
transaction to commit, whereas this prior transaction is waiting on
the MDL lock.
This fix for this is on the master side, to raise FL_DDL
flag on the GTID of a full binlog_row_image write of a sequence table.
This forces the slave to execute the statement serially so a deadlock
cannot happen.
A test verifies the deadlock also to prove it happen on the OLD (pre-fixes)
slave.
OLD (buggy master) -replication-> NEW (fixed slave) is provided.
As the pre-fixes master's full row-image may represent both
SELECT NEXT VALUE and INSERT, the parallel slave pessimistically
waits for the prior transaction to have committed before to take on the
critical part of the second (like INSERT in the test) event execution.
The waiting exploits a parallel slave's retry mechanism which is
controlled by `@@global.slave_transaction_retries`.
Note that in order to avoid any persistent 'Deadlock found' 2013 error
in OLD -> NEW, `slave_transaction_retries` may need to be set to a
higher than the default value.
START-SLAVE is an effective work-around if this still happens.
