First integration of the Arduino code in Processing 5503: PreProcessor and Compiler have been integrated with changes to the Sketch.

Compilation still has problems (Thread error on success, and can't handle non-pde files in a sketch).
Modified the Mac OS X make.sh to copy the hardware, avr tools, and example over.
Removing some of the antlr stuff.  
Disabling the Commander (command-line execution) for now.
Added Library, LibraryManager, and Target.
Added support for prefixed preferences (e.g. for boards and programmers).

hardware/libraries/EEPROM/examples/eeprom_clear/eeprom_clear.pde

@@ -0,0 +1,21 @@
+/*
+ * EEPROM Clear
+ *
+ * Sets all of the bytes of the EEPROM to 0.
+ */
+
+#include <EEPROM.h>
+
+void setup()
+{
+  // write a 0 to all 512 bytes of the EEPROM
+  for (int i = 0; i < 512; i++)
+    EEPROM.write(i, 0);
+    
+  // turn the LED on when we're done
+  digitalWrite(13, HIGH);
+}
+
+void loop()
+{
+}